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A model for biased fractionation after whole genome duplication
David Sankoff
,
Chunfang Zheng
,
Baoyong Wang
Lecture Notes in Computer Science
7262
, 2012, pp. 244-244
Exact pattern matching for RNA structure ensembles
Christina Schmiedl
,
Mathias Möhl
,
Steffen Heyne
,
Mika Amit
,
Gad M. Landau
,
Sebastian Will
,
Rolf Backofen
Lecture Notes in Computer Science
7262
, 2012, pp. 245-260
Reconstructing Boolean models of signaling
Roded Sharan
,
Richard M. Karp
Lecture Notes in Computer Science
7262
, 2012, pp. 261-271
Alignment-free sequence comparison based on next generation sequencing reads
Kai Song
,
Jie Ren
,
Zhiyuan Zhai
,
Xuemei Liu
,
Minghua Deng
,
Fengzhu Sun
Lecture Notes in Computer Science
7262
, 2012, pp. 272-285
Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
Rory Stark
Lecture Notes in Computer Science
7262
, 2012, pp. 286-286
Simultaneous reconstruction of multiple signaling pathways via the prize-collecting Steiner forest problem
Nurcan Tuncbag
,
Alfredo Braunstein
,
Andrea Pagnani
,
Shao-Shan Carol Huang
,
Jennifer Chayes
,
Christian Borgs
,
Riccardo Zecchina
,
Ernest Fraenkel
Lecture Notes in Computer Science
7262
, 2012, pp. 287-301
Function-function correlated multi-label protein function prediction over interaction networks
Hua Wang
,
Heng Huang
,
Chris Ding
Lecture Notes in Computer Science
7262
, 2012, pp. 302-313
Predicting protein-protein interactions from multimodal biological data sources via nonnegative matrix tri-factorization
Hua Wang
,
Heng Huang
,
Chris Ding
,
Feiping Nie
Lecture Notes in Computer Science
7262
, 2012, pp. 314-325
CNVeM: Copy number variation detection using uncertainty of read mapping
Zhanyong Wang
,
Farhad Hormozdiari
,
Wen-Yun Yang
,
Eran Halperin
,
Eleazar Eskin
Lecture Notes in Computer Science
7262
, 2012, pp. 326-340
Structure-based whole genome realignment reveals many novel non-coding RNAs
Sebastian Will
,
Michael Yu
,
Bonnie Berger
Lecture Notes in Computer Science
7262
, 2012, pp. 341-341
Probabilistic inference of viral quasispecies subject to recombination
Osvaldo Zagordi
,
Armin Töpfer
,
Sandhya Prabhakaran
,
Volker Roth
,
Eran Halperin
,
Niko Beerenwinkel
Lecture Notes in Computer Science
7262
, 2012, pp. 342-354
Simultaneously learning DNA motif along with its position and sequence rank preferences through EM algorithm
ZhiZhuo Zhang
,
Cheng Wei Chang
,
Willy Hugo
,
Edwin Cheung
,
Wing-Kin Sung
Lecture Notes in Computer Science
7262
, 2012, pp. 355-370
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