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A combinatorial approach to genome-wide ortholog assignment: Beyond sequence similarity search
Tao Jiang
Lecture Notes in Computer Science
4580
, 2007, pp. 1-1
Stringology: Some classic and some modern problems
S. Muthukrishnan
Lecture Notes in Computer Science
4580
, 2007, pp. 2-2
Algorithmic problems in scheduling jobs on variable-speed processors
Frances F. Yao
Lecture Notes in Computer Science
4580
, 2007, pp. 3-3
Speeding up HMM decoding and training by exploiting sequence repetitions
Shay Mozes
,
Oren Weimann
,
Michal Ziv-Ukelson
Lecture Notes in Computer Science
4580
, 2007, pp. 4-15
On demand string sorting over unbounded alphabets
Carmel Kent
,
Moshe Lewenstein
,
Dafna Sheinwald
Lecture Notes in Computer Science
4580
, 2007, pp. 16-27
Finding witnesses by peeling
Yonatan Aumann
,
Moshe Lewenstein
,
Noa Lewenstein
,
Dekel Tsur
Lecture Notes in Computer Science
4580
, 2007, pp. 28-39
Cache-oblivious index for approximate string matching
Wing-Kai Hon
,
Tak-Wah Lam
,
Rahul Shah
,
Siu-Lung Tam
,
Jeffrey Vitter
Lecture Notes in Computer Science
4580
, 2007, pp. 40-51
Improved approximate string matching and regular expression matching on Ziv-Lempel compressed texts
Philip Bille
,
Rolf Fagerberg
,
Inge Li Grtz
Lecture Notes in Computer Science
4580
, 2007, pp. 52-62
Self-normalised distance with don't cares
Peter Clifford
,
Raphaël Clifford
Lecture Notes in Computer Science
4580
, 2007, pp. 63-70
Move-to-front, distance coding, and inversion frequencies revisited
Travis Gagie
,
Giovanni Manzini
Lecture Notes in Computer Science
4580
, 2007, pp. 71-82
A Lempel-Ziv text index on secondary storage
Diego Arroyuelo
,
Gonzalo Navarro
Lecture Notes in Computer Science
4580
, 2007, pp. 83-94
Dynamic rank-select structures with applications to run-length encoded texts
Sunho Lee
,
Kunsoo Park
Lecture Notes in Computer Science
4580
, 2007, pp. 95-106
Most Burrows-Wheeler based compressors are not optimal
Haim Kaplan
,
Elad Verbin
Lecture Notes in Computer Science
4580
, 2007, pp. 107-118
Non-breaking similarity of genomes with gene repetitions
Zhixiang Chen
,
Bin Fu
,
Jinhui Xu
,
Boting Yang
,
Zhiyu Zhao
,
Binhai Zhu
Lecture Notes in Computer Science
4580
, 2007, pp. 119-130
A new and faster method of sorting by transpositions
Maxime Benoît-Gagné
,
Sylvie Hamel
Lecture Notes in Computer Science
4580
, 2007, pp. 131-141
Finding compact structural motifs
Jianbo Qian
,
Shuai Li
,
Dongbo Bu
,
Ming Li
,
Jinbo Xu
Lecture Notes in Computer Science
4580
, 2007, pp. 142-149
Improved algorithms for inferring the minimum mosaic of a set of recombinants
Yufeng Wu
,
Dan Gusfield
Lecture Notes in Computer Science
4580
, 2007, pp. 150-161
Computing exact
p
-value for structured motif
Jing Zhang
,
Xi Chen
,
Ming Li
Lecture Notes in Computer Science
4580
, 2007, pp. 162-172
Improved sketching of Hamming distance with error correcting
Ely Porat
,
Ohad Lipsky
Lecture Notes in Computer Science
4580
, 2007, pp. 173-182
Deterministic length reduction: Fast convolution in sparse data and applications
Amihood Amir
,
Oren Kapah
,
Ely Porat
Lecture Notes in Computer Science
4580
, 2007, pp. 183-194
Guided forest edit distance: Better structure comparisons by using domain-knowledge
Zeshan Peng
,
Hing-fung Ting
Lecture Notes in Computer Science
4580
, 2007, pp. 195-204
Space-efficient algorithms for document retrieval
Niko Välimäki
,
Veli Mäkinen
Lecture Notes in Computer Science
4580
, 2007, pp. 205-215
Compressed text indexes with fast locate
Rodrigo González
,
Gonzalo Navarro
Lecture Notes in Computer Science
4580
, 2007, pp. 216-227
Processing compressed texts: A tractability border
Yury Lifshits
Lecture Notes in Computer Science
4580
, 2007, pp. 228-240
Common structured patterns in linear graphs: Approximation and combinatorics
Guillaume Fertin
,
Danny Hermelin
,
Romeo Rizzi
,
Stéphane Vialette
Lecture Notes in Computer Science
4580
, 2007, pp. 241-252
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