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Computer Science Department - TU München

Chair for Efficient Algorithms

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research

projects

open student projects

Xanvi

A small framework of plugins and extension points for the analysis and visualization of biological networks.
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PAST

The Polypeptide Angles Suffix Tree (PAST) is data structure that provides fast methods for searching three-dimensional polypeptide (protein) structures and identifying frequent common substructures (structural motifs) in a protein structure database like the PDB. Unlike former approaches in this topic this approach does not consider the sequence of amino acids (i.e. the primary structure). Instead of that it uses a coding of the backbone torsion angles which is invariant to translation and rotation of the molecule in the actual coordinate system.
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teaching

past

student works: theses, semester projects & seminars

publications & presentations

miscellaneous

Jan Griebsch
navigation
email
griebsch[at]in.tum.de
phone
089 289 19430
fax
089 289 17707
room
13.02.37
address
Lehrstuhl für Effiziente Algorithmen
Institut für Informatik
Technische Universität München
Boltzmannstr. 3
D-85748 Garching